Course Information

Course Information
Course Title Code Language Type Semester L+U Hour Credits ECTS
Bacteriac Metabolism BIO607 Turkish Compulsory 3 + 0 3.0 8.0
Prerequisite Courses
Course Level Graduate
Mode of delivery Face to face
Course Coordinator Prof. Dr. Başaran DÜLGER
Instructor(s)
Goals The aim of this lecture is to get detailed knowledge about bacterial metabolism
Course Content This course will cover: Phototrophic Metabolism, Anoxic and Oxygenic Photosynthesis, CO2 Fixation, Chemolithotrophy Hydrogen Oxidation, Nitrification, Iron Oxidation, Anaerobic Metabolism, Sulfate Reduction Acetogenesis, Methanogenesis, Fermentation, Nitrogen Fixation.
Learning Outcomes
# Öğrenme Kazanımı
1 Concepts and explanations on Bacterial Metabolism are learned
2 It describes the basic principles and topics of bacterial metabolism.
3 To be able to follow and evaluate current publications on the subject.
Lesson Plan (Weekly Topics)
Week Topics/Applications Method
1. Week Phototrophic Metabolism Preparation, After Class Study, Research, Interview, Presentation (Preparation), Practice
2. Week Anoxygenic and Oxygenic Photosynthesis Preparation, After Class Study, Research, Interview, Presentation (Preparation), Practice
3. Week CO2 Fixation Interview, Presentation (Preparation)
4. Week Chemolithotrohy Preparation, After Class Study, Research, Interview, Presentation (Preparation), Practice
5. Week Hydrogen Oxidation Preparation, After Class Study, Research, Interview, Presentation (Preparation), Practice
6. Week Nitrification Preparation, After Class Study, Research, Interview, Presentation (Preparation), Practice
7. Week Arkeal phylogeny Preparation, After Class Study, Research, Interview, Presentation (Preparation), Practice
8. Week Anaerobik metabolism -1 Preparation, After Class Study, Research, Interview, Presentation (Preparation), Practice
9. Week Anaerobic metabolism -2 Preparation, After Class Study, Research, Interview, Presentation (Preparation), Practice
10. Week Sulfate Reduction Preparation, After Class Study, Research, Interview, Presentation (Preparation), Practice
11. Week Asetogenesis Preparation, After Class Study, Research, Other Activities, Interview, Presentation (Preparation), Practice
12. Week Methanogenesis Preparation, After Class Study, Research, Interview, Presentation (Preparation), Practice
13. Week Nitrogen Fixation Preparation, After Class Study, Research, Interview, Presentation (Preparation), Practice
14. Week Presentation and discussion about scientific papers Preparation, After Class Study, Research, Other Activities, Presentation (Preparation)
*Midterm and final exam dates are not specified in the 14-week course operation plan. Midterm and final exam dates are held on the dates specified in the academic calendar with the decision of the University Senate.
The Matrix for Course & Program Learning Outcomes
No Program Requirements Level of Contribution
1 2 3 4 5
1 Improve the scientific knowledge in the field of Biology to a more advanced level. Use the advenced knowledge to innovate, interpret the results, to apply the results and to design unique projects
2 Gain the ability to identify scientific questions, compare, analyze and solve the problems independently.
3 Gain the skills of using the modern laboratory techniques and analysis methods in the field of biology.
4 Gain the ability to get the information by doing research, to evaluate, interpret and apply it.
5 Gain the ability of discussion, synthesis and applying the scientific knowledge.
6 Gain the ability to design experimental studies, do the applications and analyse the complicated results using advanced skills, like critical thinking, problem solving and deciding.
7 Use the scientific knowledge and apply the ability of problem solving, evaluate and analyse advanced concepts in interdiciplinary fields.
8 Gain the scientific knowledge to set up communication with the collegues. Gain the ability to follow and use of the literature. Gain the ability to share or present the results of his/her own studies with the scientists during a scientific conference, workshop or seminar.
9 Participate scientific collaborations effectively and lead a scientific study if necessary.
10 Follow the innovations in the field of biology. Gain the ability to find resources and to use the databases.
11 Find new or strategical approaches to solve an unpredicted or advanced problems.
12 Improve scientific knowledge where there is a little or limited data present. Gain the ability to connect the information from different scientific diciplines.
13 Find unique ideas and get in contact with the professionals in scientific topics using his/her knowledge and skills.
14 Have the ability to read, understand, speak and write a foreign language in order to contact with the scientists from all over the World.
15 Follow novel developments in computational software and hardware systems related with biology, use this knowledge and skill in research.
16 Obey the ethical regulations and watch the ethical issues while designing a scientific study, collecting data, evaluating and publishing them.
17 Adopt life-long learning strategies during performing scientific studies.
Relations with Education Attainment Program Course Competencies
Program Requirements DK1 DK2 DK3
PY1 5 5 5
PY2 5 5 5
PY3 5 5 5
PY4 5 5 5
PY5 5 5 5
PY6 5 5 5
PY7 5 5 5
PY8 4 4 4
PY9 5 5 5
PY10 5 5 5
PY11 5 5 5
PY12 3 3 3
PY13 5 5 5
PY14 2 2 2
PY15 2 2 2
PY16 5 5 5
PY17 4 4 4
Recommended Sources
Ders Kitabı veya Notu Ders Kitabı veya Ders Notu bulunmamaktadır.
Diğer Kaynaklar
  • Madigan, M., Martinko, J. 2006. Brock Biology of Microorganisms (11th Edition), Prentince-Hall, USA
  • Dworkin, M., Falkowi, S., Rosenberg, E. 2006. The Prokaryotes: A Handbook on the Biology of Bacteria: Vol. 3: Archaea and Bacteria: Firmicutes, Actinomycetes. Springer, USA
  • Uçar, F., Tamer, A.Ü., Yaşa, İ., Koçyiğit, A. (2008). Prokaryotik Çeşitlilik. İzmir Güven Kitapevi, İzmir.
  • Garrity, G.M., Boone, D.R. 2001. Bergey's Manual of Systematic Bacteriology Volume 1: The Archaea and the Deeply Branching and Phototrophic Bacteria. Springer, USA
ECTS credits and course workload
ECTS credits and course workload Quantity Duration (Hour) Total Workload (Hour)
Ders İçi
Class Hours 14 3 42
Ders Dışı
Preparation, After Class Study 14 1 14
Research 14 4 56
Interview 14 3 42
Presentation (Preparation) 14 3 42
Other Activities 1 4 4
Sınavlar
Midterm 1 2 2
Final 1 2 2
Total Workload 204
*AKTS = (Total Workload) / 25,5 ECTS Credit of the Course 8.0