| Course Title | Code | Semester | L+U Hour | Credits | ECTS |
|---|---|---|---|---|---|
| Bacteriac Phylogeny | BIO512 | 3 + 0 | 3.0 | 8.0 |
| Prerequisites | None |
| Language of Instruction | Turkish |
| Course Level | Graduate |
| Course Type | |
| Mode of delivery | Face to face |
| Course Coordinator |
Prof. Dr. Başaran DÜLGER |
| Instructor(s) | |
| Assistants | |
| Goals | The aim of this lecture is to get detailed knowledge about bacterial phylogeny |
| Course Content | Introduction, General characteristics of Bacteria , Proteobacteria-I, Proteobacteria-II, Proteobacteria-III, Proteobacteria-IV, Gram-positive Bacteria , Cyanobacteria, Planctomyces, Green sulphure bacteria, Green nonsulphure bacteria, Verrrucomicrobium, Thermotoga, Aquifex, Deferribacter and Nitrospira |
| Learning Outcomes |
- 1. To learn concepts and explanations on bacterial phylogeny are learned. 2. To defines the basic principles of bacterial phylogeny. 3. To evaluate bacterial diversity and bacterial relationship. 4. To understand experimental logic, analysis and the problem solving of the relations on bacterial phylogeny. |
| Week | Topics | Learning Methods |
|---|---|---|
| 1. Week | Cell chemistry | |
| 2. Week | General characteristics of Bacteria | Visual Presentation Verbal Expression |
| 3. Week | Proteobacteria-I | Visual Presentation Verbal Expression |
| 4. Week | Proteobacteria-II | Verbal Expression Visual Presentation |
| 5. Week | Proteobacteria-III | Verbal Expression Visual Presentation |
| 6. Week | Proteobacteria-IV | Verbal Expression Visual Presentation |
| 7. Week | Gram-positive Bacteria | Verbal Expression Visual Presentation |
| 8. Week | MIDTERM | Practice |
| 9. Week | Cyanobacteria | Verbal Expression Visual Presentation |
| 10. Week | Planctomyces | Verbal Expression Visual Presentation |
| 11. Week | Green sulphure bacteria | Verbal Expression Visual Presentation |
| 12. Week | Green nonsulphure bacteria | Verbal Expression Visual Presentation |
| 13. Week | Verrrucomicrobium, Thermotoga, Aquifex | Visual Presentation Verbal Expression |
| 14. Week | Deferribacter and Nitrospira | Visual Presentation Verbal Expression |
| Madigan, M., Martinko, J. 2006. Brock Biology of Microorganisms (11th Edition), Prentince-Hall, USA |
| Dworkin, M., Falkowi, S., Rosenberg, E. 2006. The Prokaryotes: A Handbook on the Biology of Bacteria: Vol. 3: Archaea and Bacteria: Firmicutes, Actinomycetes. Springer, USA |
| Uçar, F., Tamer, A.Ü., Yaşa, İ., Koçyiğit, A. (2008). Prokaryotik Çeşitlilik. İzmir Güven Kitapevi, İzmir. |
| Garrity, G.M., Boone, D.R. 2001. Bergey's Manual of Systematic Bacteriology Volume 1: The Archaea and the Deeply Branching and Phototrophic Bacteria. Springer, USA |
| Program Requirements | Contribution Level | DK1 | Measurement Method |
|---|---|---|---|
| PY1 | 5 | 0 | - |
| PY2 | 5 | 0 | - |
| PY3 | 5 | 0 | - |
| PY4 | 5 | 0 | - |
| PY6 | 4 | 0 | - |
| PY7 | 4 | 0 | - |
| PY8 | 3 | 0 | - |
| PY9 | 3 | 0 | - |
| PY10 | 5 | 0 | - |
| PY11 | 3 | 0 | - |
| PY12 | 4 | 0 | - |
| PY13 | 4 | 0 | - |
| PY14 | 3 | 0 | - |
| PY15 | 4 | 0 | - |
| PY16 | 5 | 0 | - |
| PY17 | 5 | 0 | - |
| 0 | 1 | 2 | 3 | 4 | 5 | |
|---|---|---|---|---|---|---|
| Course's Level of contribution | None | Very Low | Low | Fair | High | Very High |
| Method of assessment/evaluation | Written exam | Oral Exams | Assignment/Project | Laboratory work | Presentation/Seminar |
| Event | Quantity | Duration (Hour) | Total Workload (Hour) |
|---|---|---|---|
| Course Hours | 14 | 3 | 42 |
| Preparation, After Class Study | 14 | 1 | 14 |
| Research | 14 | 4 | 56 |
| Other Activities | 1 | 4 | 4 |
| Verbal Expression | 14 | 3 | 42 |
| Visual Presentation | 14 | 3 | 42 |
| Midterm 1 | 1 | 2 | 2 |
| Final | 1 | 2 | 2 |
| Total Workload | 204 | ||
| ECTS Credit of the Course | 8.0 | ||
