Rapor Tarihi: 13.04.2026 03:15
| Course Title | Code | Language | Type | Semester | L+U Hour | Credits | ECTS |
|---|---|---|---|---|---|---|---|
| Bioinformatic | BMM339 | Turkish | Compulsory | 5. Semester | 3 + 0 | 3.0 | 3.0 |
| Prerequisite Courses | |
| Course Level | Undergraduate |
| Mode of delivery | Face to face |
| Course Coordinator | |
| Instructor(s) | |
| Goals | The aim of the course is to teach understanding of the informatic techniques used in the interpretation and organization of the data from biological databases. |
| Course Content | Bioinformatics concept and its applications, information theory, collection of data, its manipulation and allocation, creation of a database and its usage, analysis of protein and nucleotide databases, primer design, interpretation of nucleotide sequence analysis results. |
| # | Öğrenme Kazanımı |
| 1 | Students will learn the usage of bioinformatics. |
| 1 | Introduction to Biofluid Systems |
| 1 | Students will learn the usage of bioinformatics. |
| 2 | Students will understand the collection and processing data. |
| 2 | They learn and understand the fundamental principles of biofluids. |
| 2 | Students will understand the collection and processing data. |
| 3 | Students will be able to use biological databases. |
| 3 | Fundamental Principles of Momentum Transfer and Newton's Law of Momentum |
| 3 | Students will be able to use biological databases. |
| 4 | Students will have knowledge on the interpretation of the sequence analysis results. |
| 4 | Having knowledge of fluid dynamics and statics. |
| 4 | Students will have knowledge on the interpretation of the sequence analysis results. |
| 5 | Understanding Bernoulli's principle and applying it to fluids. |
| Week | Topics/Applications | Method |
|---|---|---|
| 1. Week | Bioinformatics concept | |
| 1. Week | Introduction to Biofluid Mechanics | Preparation, After Class Study |
| 1. Week | Bioinformatics concept | |
| 2. Week | Uses of bioinformatics | |
| 2. Week | Fluid Statics | Preparation, After Class Study |
| 2. Week | Uses of bioinformatics | |
| 3. Week | Information theory | |
| 3. Week | Fluid Kinematics-1 | Other Activities |
| 3. Week | Information theory | |
| 4. Week | Collecting and processing information | |
| 4. Week | Fluid Kinematics-2 | Practice |
| 4. Week | Collecting and processing information | |
| 5. Week | Collecting and processing information | |
| 5. Week | Classification of Fluids | Preparation, After Class Study, Other Activities |
| 5. Week | Collecting and processing information | |
| 6. Week | Sharing the information | |
| 6. Week | Blood Circulation | Other Activities |
| 6. Week | Sharing the information | |
| 7. Week | Creating and using databases | |
| 7. Week | Mass, Bernoulli, and Energy Equations 1 | Preparation, After Class Study, Other Activities |
| 7. Week | Creating and using databases | |
| 8. Week | Midterm | |
| 8. Week | Mass, Bernoulli, and Energy Equations 2 | Practice |
| 8. Week | Midterm | |
| 9. Week | Nucleic acid and protein biochemistry | |
| 9. Week | Midterm Exam and discussion of questions. | Other Activities |
| 9. Week | Nucleic acid and protein biochemistry | |
| 10. Week | Nucleic acid and protein biochemistry | |
| 10. Week | 80 / 5.000 Cardiovascular system, blood circulation and flow rate, the law of continuity of flow. | Practice |
| 10. Week | Nucleic acid and protein biochemistry | |
| 11. Week | Analysis of nucleic acid databases | |
| 11. Week | Laplace's Law and Blood Flow Measurement | Practice |
| 11. Week | Analysis of nucleic acid databases | |
| 12. Week | Analysis of nucleic acid databases | |
| 12. Week | The body's response to blood and biomaterials. | Preparation, After Class Study |
| 12. Week | Analysis of nucleic acid databases | |
| 13. Week | Primer design | |
| 13. Week | Applications of Bernoulli and other fluid formulations related to biofluids. | Practice |
| 13. Week | Primer design | |
| 14. Week | interpretation of nucleotide sequence analysis results. | |
| 14. Week | Applications related to biofluids | Practice |
| 14. Week | interpretation of nucleotide sequence analysis results. |
| No | Program Requirements | Level of Contribution | |||||
|---|---|---|---|---|---|---|---|
| 1 | 2 | 3 | 4 | 5 | |||
| 1 | It explains the theories and principles related to the field. | ✔ | |||||
| 2 | It provides practical skills in the field of Biomedical Engineering by utilizing knowledge from health sciences and engineering. | ✔ | |||||
| 3 | It provides the ability to design and develop all or a component of a medical device, software, or product used in the healthcare field under realistic conditions. | ✔ | |||||
| 4 | It provides the ability to define, model, and solve a problem encountered in medicine using engineering approaches. | ✔ | |||||
| 8 | To gain verbal and written communication skills. To enable effective use of a foreign language in professional life. | ✔ | |||||
| Program Requirements | DK1 | DK2 | DK3 | DK4 | DK5 | DK6 | DK7 | DK8 | DK9 |
|---|---|---|---|---|---|---|---|---|---|
| PY1 | 5 | 5 | 5 | 5 | 5 | 5 | 5 | 5 | 5 |
| PY2 | 4 | 4 | 4 | 4 | 4 | 4 | 4 | 4 | 4 |
| PY3 | 5 | 5 | 5 | 5 | 5 | 5 | 5 | 5 | 5 |
| PY4 | 4 | 4 | 4 | 4 | 4 | 4 | 4 | 4 | 4 |
| PY8 | 5 | 5 | 5 | 5 | 5 | 5 | 5 | 5 | 5 |
| Ders Kitabı veya Notu | Ders Kitabı veya Ders Notu bulunmamaktadır. |
|---|---|
| Diğer Kaynaklar |
|
| ECTS credits and course workload | Quantity | Duration (Hour) | Total Workload (Hour) | |
|---|---|---|---|---|
|
Ders İçi |
Class Hours | 14 | 3 | 42 |
|
Sınavlar |
Midterm | 1 | 30 | 30 |
| Final | 1 | 30 | 30 | |
| Total Workload | 102 | |||
| *AKTS = (Total Workload) / 25,5 | ECTS Credit of the Course | 3.0 | ||
